Treeplyr

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August undefined, 2024

WebHowever, to our knowledge, treeplyr (Uyeda & Harmon, 2024) and tidytree , both based on dplyr (Wickham et al., 2024a; Wickham et al., 2024b), are to our knowledge, the only … WebNov 26, 2024 · treedata.table was >400% faster than treeplyr during the initial data/tree matching step ( Fig. 2 ). For instance, combining a dataset with 10 tips to a character matrix of 40

treeplyr package - RDocumentation

WebIn treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects. Description Usage Arguments Value Examples. View source: R/treeplyr_functions.R. Description. Applies a … WebMar 1, 2024 · Check Details. Version: 0.1.10 Check: whether package can be installed Result: WARN Found the following significant warnings: Warning: replacing previous import ... college football games on cbs

RevGadgets: An R package for visualizing Bayesian ... - besjournals

Web関数名概略; encoding: Guess and repair faulty symbol encoding. google_form: Make link to google form given user: html: Parse an HTML page. html_form Webtreeplyr. An R package for using dplyr on matched tree and data objects. To install treeplyr directly from github, use the package devtools: remotes::install_github ("uyedaj/treeplyr") dr peter nicholas

forceNumeric: Function for checking whether a treedata object …

WebNEWS AND NOTES 556 Changes on CRAN 2024-12-01 to 2024-06-30 by Kurt Hornik, Uwe Ligges and Achim Zeileis In the past 7 months, 1178 new packages were added to the CRAN package repository. WebRT @CRANberriesFeed: CRAN removals: confoundr extdplyr helda JumpeR LARGB MBNMAtime metacore metatools multicolor NobBS PHEindicatormethods starschemar SwimmeR treeplyr wcep #rstats. 01 Mar 2024 09:02:26 dr. peter nold consultingWebAn implementation that combines trait data and a phylogenetic tree (or trees) into a single object of class treedata.table. The resulting object can be easily manipulated to simultaneously change the trait- and tree-level sampling. Currently implemented functions allow users to use a data.table syntax when performing operations on the trait dataset … college football games on dvd for sale

"WebPackage ‘treeplyr’ was removed from the CRAN repository. Formerly available versions can be obtained from the archive. Archived on 2024-03-01 as issues were not corrected … " - Treeplyr

Treeplyr

WebOct 30, 2024 · Statistical phylogenetic methods are the foundation for a wide range of evolutionary and epidemiological studies. However, as these methods grow increasingly complex, users often encounter significant challenges with summarizing, visualizing and communicating their key results. WebIn treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects. Description Usage Arguments Value Examples. View source: R/treeplyr_functions.R. Description. This …

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Web## A treeplyr treedata object ## The dataset contains 10 traits ## Continuous traits: Binomial Family Genus SVL mass rootmass eyesize ## Discrete traits: Adult_habitat … WebDescription. Reorders a treedata object. Both the tips and the data are automatically reordered to match.

WebMatches phylogenetic trees and trait data, and allows simultaneous manipulation of the tree and data using 'dplyr'. WebAug 8, 2024 · Here we use the Anolis dataset from treeplyr. Traits in this dataset were randomly generated for a set of 100 species. library (ape) library (treedata.table) # Load …

Webtreeplyr can use dplyr-style functions (filter, mutate, reorder, etc.) on objects consisting of trees plus associated data. tidytree can convert a tree object in to a tidy data frame and has other tidy approaches to manipulate tree data. evobiR can do fuzzy matching of names (to allow some differences). WebFeb 4, 2024 · Package ‘treeplyr’ October 14, 2024 Type Package Title 'dplyr' Functionality for Matched Tree and Data Objects Version 0.1.10 Date 2024-09-04 Maintainer Josef Uyeda …

WebAn optional argument that specifies the column of data that contains the names to be matched to the tree. By default, it is set to "detect" which finds the column with the most …

WebIn treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects. Description Usage Arguments Value Examples. View source: R/treeplyr_functions.R. Description. This … dr peter oas nicevilleWebFeb 24, 2024 · Check Details. Version: 0.1.10 Check: whether package can be installed Result: WARN Found the following significant warnings: Warning: replacing previous import ... college football games on december 31 2022WebNov 10, 2024 · treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects Matches phylogenetic trees and trait data, and allows simultaneous manipulation of the tree and … college football games on black fridayWebFeb 28, 2024 · treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects. Matches phylogenetic trees and trait data, and allows simultaneous manipulation of the tree and … college football games on foxWebSep 26, 2024 · A fast, consistent tool for working with data frame like objects, both in memory and out of memory. college football games on huluWebtreeplyr This R package matches phylogenetic trees and trait data, and allows simultaneous manipulation of the tree and data using dplyr. treedata.table college football games on dish network todayWebtreeplyr: 'dplyr' Functionality for Matched Tree and Data Objects Description. Matches phylogenetic trees and trait data, and allows simultaneous manipulation of the tree and … college football games on november 26 2022